Gene expression UMAP
_mese.png)
_legend.svg)
Other cell groups
all cells_thumb_all.png) |
blastomeres |
PGCs_thumb_pgc.png) |
endoderm_thumb_endo.png) |
axial mesoderm_thumb_axia.png) |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme _thumb_mese.png) |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mia | 0.193 | marcksl1a | -0.066 |
| wisp3 | 0.170 | tmsb4x | -0.060 |
| snorc | 0.169 | mfap2 | -0.058 |
| meltf | 0.167 | col1a2 | -0.052 |
| matn1 | 0.164 | col5a1 | -0.049 |
| acana | 0.164 | pmp22a | -0.048 |
| ptgdsa | 0.163 | si:ch211-222l21.1 | -0.048 |
| pcolceb | 0.161 | marcksl1b | -0.047 |
| tnxba | 0.161 | krt18b | -0.047 |
| ppp1r1c | 0.156 | col1a1a | -0.047 |
| si:dkey-19b23.8 | 0.156 | twist1a | -0.044 |
| hapln1b | 0.156 | dcn | -0.044 |
| itih1 | 0.142 | hspa8 | -0.041 |
| si:dkey-262k9.2 | 0.141 | col1a1b | -0.039 |
| sept8b | 0.137 | hmgb3a | -0.038 |
| fgfbp2b | 0.136 | hmga1a | -0.037 |
| col11a2 | 0.136 | hmgn6 | -0.036 |
| CABZ01054023.1 | 0.135 | hmgb2b | -0.036 |
| znf385c | 0.133 | her6 | -0.035 |
| emilin3a | 0.132 | fthl27 | -0.035 |
| slc38a5a | 0.127 | fmoda | -0.035 |
| ucmab | 0.127 | mdka | -0.035 |
| cthrc1b | 0.126 | actb1 | -0.035 |
| csgalnact1a | 0.125 | rbp5 | -0.034 |
| eps8l2 | 0.124 | hmgb1b | -0.034 |
| si:dkey-6n6.1 | 0.124 | colec12 | -0.033 |
| epyc | 0.122 | si:ch211-286o17.1 | -0.033 |
| si:ch211-106h11.3 | 0.120 | cd248b | -0.033 |
| itih6 | 0.120 | ctsla | -0.032 |
| pdcd6 | 0.118 | postnb | -0.032 |
| col9a3 | 0.116 | lrrc17 | -0.032 |
| acanb | 0.115 | tmem119b | -0.032 |
| slc35d1a | 0.113 | hmgn2 | -0.032 |
| wwp2 | 0.111 | plpp3 | -0.032 |
| bicdl2 | 0.111 | fzd2 | -0.031 |